Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015876465.1_cds_XP_016436108.1_32002
CDS Infomation

[gene=LOC107762275] [db_xref=GeneID:107762275] [protein=lipase-like PAD4] [protein_id=XP_016436108.1] [location=join(51032..51051,51136..51454,55401..56069,56299..57120)] [gbkey=CDS]
Sequence

ATGGAATCGGAAGCTTCATCGTTCGAGTCGAGCGAGACGTTGGCAGCTTTTGTGGCGTCG
ACGCCGTTGCTGGAGGAGTCGTTGAAGGCTTGCGGCGTCGCCGATGCCTCGGTGGATAGC
CACTTCGCCGTGATTAAAGTTGGTGGGACAGCATATGTCGCGTTCTCCGGCATCAAATTG
GCCGCCGGAGTCGACCAAAGTTGCCGGAATTTGTTGCCGCTTCCCGATGAACTATTTTCT
GGCTTGTGCATGGATGGGACGGATAATCCGCCCATGGTCCATGCCGGATTATTGCATCTT
TTCCAATCCGTTTACACAAAAAATTTCTTCCGTAATCAGATGGTAGAAATAATGAACACG
AGCAAGTCAATAGTCATAACAGGACACTCAGTTGGAGGAGCAATTGCTTCCCTCTTAGCT
CTTTGGCTTCTCTCCCACCCGCAAAATGTCTGTTCATTAATTTGCATTACTTTTGGCTCT
CCAATGCTTGGCAATGAGTCCTTTTCCCAAACCATTCTTCAAGAAAGATGGGCTGGACAT
TTTTCCCATGTGGTTTCACAGCATGATATAGTGCCAAGACTGCTCTTTGCCCCTTCTCCT
ACCCCACTTATTGCACTGGCTTCGTCTTCTTGTTCTTTCCAGTTTATTTTTCACTTATCA
GAGGAAAACAAGACTCAGCTATTCCGCGTTGTGTTGGCTTCTCTTGAAGTTATATCAAAA
GGTGAATGTAAGAGTTCATTTTGGCCCTTTGGAAGCTACTTGTTCTTCACCAACATGGGT
GCAGTTTGTGTCGATAATGGGATGCTTATCGTTAAGTTGCTTTACTTGATGTTACTGAAT
GGTTCACCAAGTTCTAGCCTCGAGGATCATCTTGGTTATACGCATTATATTCAGAAACTT
CATTGGCAATTTATAGAGAGTAGAAGCTTCATGGGAGGCAATCTACCTGAGGCAAGCTAT
GAAGCAGGGATAACATTGGCGCTGGAGTCGCTAGGAATAGCTTCTCATGAATTGAATTCA
GAAGATGCTAAGAAGGCCCTGAAAGAGGCAAAAAAGTCAGGTCGAACTCGCAACCTTAAT
AGTGCCATCCTTGCAATTGATTTATCCAAGATCAATCCACTAAGAGCACAAATAGAGTGG
TATAAAGCATCCTGTGATAAATCTAGTGATCAAATGGGATATTACGATTCGTACAAGCAA
CGAGGCAAACGAGGTGCCTCGAAAAGAGACTTTAAGGTCAATATGAACAGGATCAGACTT
GCAAAGTTTTGGGATTCTGTGATTGACAAGTGGGAAAAGAATCAATTGCCTTATGATTTT
CACAAGCGTGCGAAGTGGGTAAATGCTTCTCAGTTCTACAAACTCCTCGTAGAGCCACTC
GATATCGCAGAGTACTATAGGAGTGGGATGCATCATGTGAAAGGCCACTATATGAAGCAC
GGTAGGGAGAGAAGGTACAAGATTTTTGATACGTGGTGGAATGACGGAGAGGTTGAGAAT
GGCACAGATCATACTACTGCTGCAAGGAGCAGGTTCGCGAGTTCGACACAAGATTCATGC
TTTTGGGCTAAGGTTGAGGAGGCAAGAGACAGGCTGATTAAAGTCAGAGCTGAGGCTGAT
GCCAGAAAGTTTGTCAAGATATTGGAAGATATCACTAAGTTTGATCAATATGCGAGGAGA
TTGATTGAAAATAAGGAGGTTTCAATAGATGTTTTGGCCAAAAACTCAAGCTACACATTG
TTTATAGAGGAATGGAAGGAATTCCAATCTCAGTTACAGCTGTTCCAACCTTACTTTCCT
GGAATTCCTGAGGGTGAAATGGTTCCTTAG

Peptide Sequence

PEP ID

XP_016436108.1
PEP Infomation

PREDICTED: lipase-like PAD4 [Nicotiana tabacum]
Sequence

MESEASSFESSETLAAFVASTPLLEESLKACGVADASVDSHFAVIKVGGTAYVAFSGIKL
AAGVDQSCRNLLPLPDELFSGLCMDGTDNPPMVHAGLLHLFQSVYTKNFFRNQMVEIMNT
SKSIVITGHSVGGAIASLLALWLLSHPQNVCSLICITFGSPMLGNESFSQTILQERWAGH
FSHVVSQHDIVPRLLFAPSPTPLIALASSSCSFQFIFHLSEENKTQLFRVVLASLEVISK
GECKSSFWPFGSYLFFTNMGAVCVDNGMLIVKLLYLMLLNGSPSSSLEDHLGYTHYIQKL
HWQFIESRSFMGGNLPEASYEAGITLALESLGIASHELNSEDAKKALKEAKKSGRTRNLN
SAILAIDLSKINPLRAQIEWYKASCDKSSDQMGYYDSYKQRGKRGASKRDFKVNMNRIRL
AKFWDSVIDKWEKNQLPYDFHKRAKWVNASQFYKLLVEPLDIAEYYRSGMHHVKGHYMKH
GRERRYKIFDTWWNDGEVENGTDHTTAARSRFASSTQDSCFWAKVEEARDRLIKVRAEAD
ARKFVKILEDITKFDQYARRLIENKEVSIDVLAKNSSYTLFIEEWKEFQSQLQLFQPYFP
GIPEGEMVP

Transcript Sequence

Gene sequence data has not been registered.